Ngoc-Quang Nguyen
Ph.D, Korea University
Computer Science and Engineering
Korea University College of Informatics
ngocquang870@gmail.com
About
I am currently employed as a full-time researcher at DMIS, where I have the privilege of working under the guidance of Professor Jaewoo Kang at Korea University. Prior to this, I obtained my BEng degree from Vietnam National University, Hanoi. I also successfully completed my M.S. in Computer Science and Engineering at Gachon University, under the supervision of Professor Sangwoong Lee.
The majority of my individual research involves the integration of data science, artificial intelligence, machine learning, and formal reasoning in order to accelerate bio/medical science in the service of people. In particular, below are some keywords of my recent interests:- Large Multimodal Models (LMMs)
- 3D geometric information
- Equivariant neural network
News
- [May(23). 2024] I have successfully defended my dissertation entitled "Multimodal Deep Learning Approaches for Compound-Protein Interaction Prediction Tasks in Drug Discovery."!
- [Feb. 2024] I received a BK21 Graduate Innovation Project Scholarship(the sole candidate in the CSE department for the GAG-KU track for international students.)!
- [Dec. 2023] MulinforCPI paper was accepted to Briefings in Bioinformatics journal!
- [Nov. 2023] I had an invited talk at Mogam Institue for Biomedical Research about PerceiverCPI!
- [Feb. 2023] I received an Excellent Paper Scholarship from Korea University!
- [Nov. 2022] PerceiverCPI paper was accepted to Bioinformatics journal!
Research Experience
DMIS Lab Seoul, Korea
Ph.D, Student Sep. 2020 - Present
Advisor: Jaewoo Kang, Ph.D
Colleague: Mujeen Sung, Ph.D Letter of recommendation
AI Lab, Voronoi Inc Incheon, Korea
Machine learning and AI researcher Aug. 2019 - Jul. 2020
Manager: Hyunseok Kim
Colleague: Tran Le Anh Tuan, Ph.D Letter of recommendation
PRML LabGyeonggi, Korea
MSc, Student Sep. 2017 - Jul. 2019
Advisor: Sangwoong Lee, Ph.D Letter of recommendation
Publications
Most recent publications on Google Scholar.
MulinforCPI: enhancing precision of compound-protein interaction prediction through novel perspectives on multi-level information integration
Ngoc-Quang Nguyen; Sejeong Park; Mogan Gim; Jaewoo Kang
Briefings in Bioinformatics, 2023
PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction
Ngoc-Quang Nguyen; Gwanghoon Jang; Hajung Kim; Jaewoo Kang
Bioinformatics, 2022
Robust Boundary Segmentation in Medical Images Using a Consecutive Deep Encoder-Decoder Network
Ngoc-Quang Nguyen; Sang-Woong Lee
IEEE Access, 2019
Classification of breast cancer histology images using incremental boosting convolution networks
Duc My Vo; Ngoc-Quang Nguyen; Sang-Woong Lee
Information Sciences, 2018
MolPLA: A Molecular Pretraining Framework for Learning Cores, R-Groups and their Linker Joints
Mogan Gim; Jueon Park; Soyon Park; Sanghoon Lee; Seungheun Baek; Junhyun Lee;Ngoc-Quang Nguyen; Jaewoo Kang
ISMB (Intelligent Systems for Molecular Biology), 2024
MulinforCPI: enhancing precision of compound-protein interaction prediction through novel perspectives on multi-level information integration
Ngoc-Quang Nguyen; Sejeong Park; Mogan Gim; Jaewoo Kang
Briefings in Bioinformatics, 2023
PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction
Ngoc-Quang Nguyen; Gwanghoon Jang; Hajung Kim; Jaewoo Kang
Bioinformatics, 2022
Contour-aware Polyp Segmentation in Colonoscopy Images using Detailed Upsampling Encoder-Decoder Networks
Ngoc-Quang Nguyen; Duc My Vo; Sang-Woong Lee
IEEE Access, 2020
Robust Boundary Segmentation in Medical Images Using a Consecutive Deep Encoder-Decoder Network
Ngoc-Quang Nguyen; Sang-Woong Lee
IEEE Access, 2019
Classification of breast cancer histology images using incremental boosting convolution networks
Duc My Vo; Ngoc-Quang Nguyen; Sang-Woong Lee
Information Sciences, 2018
Colorectal segmentation using multiple encoder-decoder networks in colonoscopy images
Ngoc-Quang Nguyen; Sang-Woong Lee
AIKE, Laguna Hills, 2018
ISIC 2017 skin lesion segmentation using deep encoder-decoder network
Ngoc-Quang Nguyen
Preprint ISIC 2017 challenge, 2018
Academic Services
Vitæ
1-Page CV PDF.
Full CV: PDF.
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Korea University Sep 2020 – PresentPh.D, Computer Science and Engineering
Advisor: Jaewoo Kang, DMIS Lab (https://dmis.korea.ac.kr/) -
Voronoi inc. Aug. 2019 - Jul. 2020Machine learning and AI researcher
AI lab -
Gachon University Sep. 2017 - Jul. 2019MSc, Computer Science and Engineering
Advisor: Sangwoong Lee, PRML lab (http://pr.gachon.ac.kr/) -
NTQ Solution Jun 2015 - Sep 2015Robotic engineering intern
R&D lab -
Vietnam National University Sep. 2012 - Mar. 2017BEng, Mechanical Engineering
Hanoi, Vietnam